Posts

2024

Learn to DIY AOG

Learn to DIY AOG: how to write my own analyses and visual recipes for AOG
Published on Jul 30, 2024.

Random walk on the usage of Dataframes[Meta].jl

re-learning the DataFrames.jl and DataFramesMeta.jl ecosystem.
Published on Jul 19, 2024.

2022

Easily insert citations in my Franklin Blog

Setup my franklin blog builder to easily insert references to a blog, with jump links, and formatted according to BibTex local database.
Published on Sep 29, 2022.

When Reveal.js meets Franklin.jl

Setup my Franklin.js functions to better work with Reveal.js.
Published on Sep 26, 2022.

Julia中的反模式

低配翻译Julia大佬Frames的博客.
Published on Sep 21, 2022.

Make my own bioinformatics parser with Automa.jl

Parse WGA chain file into dict of IntervalCollections
Published on Sep 20, 2022.

Filepaths in julia with FilePathsBase

Dealing with file paths in julia, using FilePathsBase.jl
Published on Sep 16, 2022.

IntervalTrees and GenomicFeatures usage

Basic usage of BioJulia IntervalTrees.jl and GenomicFeatures.jld
Published on Sep 13, 2022.

Notes on franklin's gramma

learn franklin's markdown gramma and make some DIY
Published on Aug 23, 2022.

Use nutshell in my Franklin blog

Set up nutshell in my julia/Franklin.jl based blog.
Published on Aug 20, 2022.

Add visitor stat to my blog

Using busuanzi.js to stat the visitors in my blog.
Published on Aug 20, 2022.

Julia v1.8 新特性

新鲜出炉的Julia 1.8新的改动(其实已经不新了)
Published on Aug 19, 2022.

我的fzf配置

模糊搜索用得好, 搬砖效率高不少!
Published on Aug 18, 2022.

docker和singularity容器使用简介

简单用法介绍docker和singularity
Published on Aug 17, 2022.

odgi-泛基因组分析工具包

Instruction of pan-genome analysis toolkit ODGI. 介绍泛基因组分析工具包ODGI的使用。
Published on Aug 17, 2022.

Latex公式语法

Useful latex markdown gramma.
Published on Aug 14, 2022.

Franklin静态博客配置记录

Franklin一些使用技巧记录.
Published on Aug 13, 2022.

Franklin博客中设置提示框和alert高亮

配置我的Flanklin博客高亮提示框
Published on Aug 12, 2022.

Julia流程搭建工具Pipeline

用Pipeline.jl搭建生物分析流程, 让julia成为生产力!
Published on Aug 11, 2022.

2018

snp_slidewin_to_bin

Sliding windows method for binning in genetic map construction
Published on Jul 2, 2018.

linux_bash_note

My note on linux shell commands, mainly bash
Published on May 5, 2018.

repeatmasker-usage

Brief usage of Repeatmasker
Published on May 3, 2018.

bowtie2-usage

Brief usage of Bowtiew2: a short reads aligner
Published on Feb 5, 2018.

evolution_related_tools

Brief usage of some evolution related tools: - jModeltest: for model selection - phyML: ml tree - RAxML: faster ml tree - mrbayes: bayes tree -paml-codeml: branch-site model
Published on Feb 5, 2018.

mapcomp

usage of mapcomp: a tool for comparing two genetic maps
Published on Feb 5, 2018.

trf-usage

Brief usage of TRF: a tandem repeats finder
Published on Feb 5, 2018.

2017

bash_on_ubuntu_on_windows

How to set up bash on ubuntu on windows on win10
Published on Nov 25, 2017.

r_note

My R-language note
Published on Nov 25, 2017.

Office_word_High_CPU_using

解决word占用cpu过高的办法
Published on Sep 8, 2017.

busco-usage

Brief usage of BUSCO: estimating genome/transcript/protein completeness based on Single Copy Orthologs
Published on Jun 3, 2017.

window_UAC

how to setup UAC for windows users
Published on Apr 13, 2017.

sicer-usage

Brief usage of sicer: a chip-seq tool
Published on Feb 24, 2017.

Irys-scaffolding-pipeline

Brief Introduction to the Irys scaffolding pipeline, for bionano optical map assembly.
Published on Feb 10, 2017.

2016

photoshop_gif_wechat

用photoshop修改gif, 制作微信表情
Published on Dec 29, 2016.

comparative_genomics_related_things

Mummer and LastZ for WGA
Published on Dec 25, 2016.

misa_primer3_pipeline

Pipeline of: Identify SSR with misa, then design primers with primer3
Published on Dec 25, 2016.

mstmap_geneticmap

mstmap: genetic map made easy
Published on Dec 21, 2016.

perl_note

my perl note, mainly perl one-liners
Published on Dec 13, 2016.